This page provides a brief description of the JigCell software components. All of our sofware is available free for use under the DARPA BioSPICE user license.
At the moment, our components do not have proper central user interface. In the future, all JigCell components will be integrated together using the Project Manager.
Users define and edit models using the Model Builder.
The Run Manager allows users to define an ensemble of runs and execute them easily.
The Comparator gives an easy way to determine how well the model matches the collection experimental results that it is attempting to reproduce.
JigCell provides support for automated Parameter Estimation.
Software developers who need to parse SBML files might wish to use our Java-based SBML Parser.